Dissertation
STUDIES ON VIRUSES ASSOCIATED WITH RED LEAF SYMPTOMS IN WASHINGTON VINEYARDS
Doctor of Philosophy (PhD), Washington State University
01/2017
Handle:
https://hdl.handle.net/2376/118254
Abstract
Viral diseases are one of the significant constraints to sustainability of the grape and wine industry that contributes nearly $5 billion annually to Washington State’s economy. This study was undertaken to gain a better understanding of grapevine leafroll (GLD) and red blotch (GRBD) diseases causing red leaf symptoms for managing these two virus diseases in vineyards. In the first objective, a large-scale survey was conducted for three growing seasons to assess the prevalence of GRBD and GLD in vineyards. Overall results indicated that Grapevine leafroll-associated virus 3 (GLRaV-3) was more predominant and wide spread than Grapevine red blotch virus (GRBV). The data underscored the critical need for reliable identification of GLRaV-3 and GRBV in vines showing red leaf symptoms and to differentiate virus symptoms from those induced by biotic factors and abiotic stresses. A multiplex PCR assay was developed for the simultaneous detection of GLRaV-3 and GRBV. Phylogenetic analysis indicated the presence of GRBV variants in Washington vineyards that segregated into two well-separated clades. In the second objective, impacts of GRBD were studied in a vineyard field-grafted with cv. Sangiovese showing atypical symptoms of the disease. A comparative analysis between symptomatic vines tested positive for GRBV and non-symptomatic vines negative for GRBV indicated that virus infection can cause significant impacts on shoot biomass, fruit yield and grape quality in field-grafted Sangiovese vines. Since field-grafting results in grafted vines with a blend of characteristics inherited from two distinct types of grapevines, the data provided a foundation for further studies on elucidating the influence of grafting vinifera to vinifera on host-virus interactions. Among the GLRaVs reported earlier from Washington vineyards, very little information is available on the genome characteristics of GLRaV-4 and its strains. In the third objective, the complete genome sequence of GLRaV-4 strains -4, -5, and -9 was determined. The genome sequences of these strains were compared with corresponding sequences of GLRaV-4 and its strains reported from other grapevine-growing regions. Together with sequence information available for GLRaV-1, 2, and -3, the data generated in this objective will provide new avenues for investigating the comparative molecular biology of GLRaVs infecting grapevines.
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Details
- Title
- STUDIES ON VIRUSES ASSOCIATED WITH RED LEAF SYMPTOMS IN WASHINGTON VINEYARDS
- Creators
- Jati Adiputra
- Contributors
- Naidu A Rayapati (Advisor)Dennis Johnson (Committee Member)Doug Walsh (Committee Member)Alexander karasev (Committee Member)
- Awarding Institution
- Washington State University
- Academic Unit
- Department of Plant Pathology
- Theses and Dissertations
- Doctor of Philosophy (PhD), Washington State University
- Number of pages
- 126
- Identifiers
- 99900581717201842
- Language
- English
- Resource Type
- Dissertation