Journal article
A consolidated linkage map for rainbow trout (Oncorhynchus mykiss)
Animal genetics, Vol.34(2), pp.102-115
04/2003
Handle:
https://hdl.handle.net/2376/109349
PMID: 12648093
Abstract
Androgenetic doubled haploid progeny produced from a cross between the Oregon State University and Arlee clonal rainbow trout (Oncorhynchus mykiss) lines, used for a previous published rainbow trout map, were used to update the map with the addition of more amplified fragment length polymorphic (AFLP) markers, microsatellites, type I and allozyme markers. We have added more than 900 markers, bringing the total number to 1359 genetic markers and the sex phenotype including 799 EcoRI AFLPs, 174 PstI AFLPs, 226 microsatellites, 72 VNTR, 38 SINE markers, 29 known genes, 12 minisatellites, five RAPDs, and four allozymes. Thirty major linkage groups were identified. Synteny of linkage groups in our map with the outcrossed microsatellite map has been established for all except one linkage group in this doubled haploid cross. Putative homeologous relationships among linkage groups, resulting from the autotetraploid nature of the salmonid genome, have been revealed based on the placement of duplicated microsatellites and type I loci.
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Details
- Title
- A consolidated linkage map for rainbow trout (Oncorhynchus mykiss)
- Creators
- K M Nichols - School of Biological Sciences, Washington State University, Pullman, WA, USAW P YoungR G DanzmannB D RobisonC RexroadM NoakesR B PhillipsP BentzenI SpiesK KnudsenF W AllendorfB M CunninghamJ BrunelliH ZhangS RistowR DrewK H BrownP A WheelerG H Thorgaard
- Publication Details
- Animal genetics, Vol.34(2), pp.102-115
- Academic Unit
- Biological Sciences, School of
- Publisher
- England
- Identifiers
- 99900547126101842
- Language
- English
- Resource Type
- Journal article