Journal article
Complete genome sequence of Nitrosomonas sp. Is79, an ammonia oxidizing bacterium adapted to low ammonium concentrations
Standards in genomic sciences, Vol.7(3), pp.469-482
2013
Handle:
https://hdl.handle.net/2376/108385
PMCID: PMC3764937
PMID: 24019993
Abstract
Nitrosomonas sp.
Is79 is a chemolithoautotrophic ammonia-oxidizing bacterium that belongs to the family
Nitrosomonadaceae
within the phylum
Proteobacteria
. Ammonia oxidation is the first step of nitrification, an important process in the global nitrogen cycle ultimately resulting in the production of nitrate.
Nitrosomonas sp.
Is79 is an ammonia oxidizer of high interest because it is adapted to low ammonium and can be found in freshwater environments around the world. The 3,783,444-bp chromosome with a total of 3,553 protein coding genes and 44 RNA genes was sequenced by the DOE-Joint Genome Institute Program CSP 2006.
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Details
- Title
- Complete genome sequence of Nitrosomonas sp. Is79, an ammonia oxidizing bacterium adapted to low ammonium concentrations
- Creators
- Annette Bollmann - Miami University, Oxford, Ohio, USAChristopher J Sedlacek - Miami University, Oxford, Ohio, USAJeanette Norton - Utah State University, Logan, Utah, USAHendrikus J Laanbroek - Netherlands Institute for Ecology, Wageningen, The NetherlandsYuichi Suwa - Chuo University, Tokyo, JapanLisa Y Stein - University of Alberta, Edmonton, Alberta, CanadaMartin G Klotz - University of North Carolina, Charlotte, North Carolina, USADaniel Arp - Oregon State University, Corvallis, Oregon, USALuis Sayavedra-Soto - Oregon State University, Corvallis, Oregon, USAMegan Lu - Los Alamos National Laboratory, Bioscience Division, Los Alamos, New Mexico, USADavid Bruce - Los Alamos National Laboratory, Bioscience Division, Los Alamos, New Mexico, USAChris Detter - Los Alamos National Laboratory, Bioscience Division, Los Alamos, New Mexico, USARoxanne Tapia - Los Alamos National Laboratory, Bioscience Division, Los Alamos, New Mexico, USAJames Han - DOE Joint Genome Institute, Walnut Creek, California, USATanja Woyke - DOE Joint Genome Institute, Walnut Creek, California, USASusan M Lucas - DOE Joint Genome Institute, Walnut Creek, California, USASam Pitluck - DOE Joint Genome Institute, Walnut Creek, California, USALen Pennacchio - DOE Joint Genome Institute, Walnut Creek, California, USAMatt Nolan - DOE Joint Genome Institute, Walnut Creek, California, USAMiriam L Land - Oak Ridge National Laboratory, Oak Ridge, Tennessee, USAMarcel Huntemann - DOE Joint Genome Institute, Walnut Creek, California, USAShweta Deshpande - DOE Joint Genome Institute, Walnut Creek, California, USACliff Han - Los Alamos National Laboratory, Bioscience Division, Los Alamos, New Mexico, USAAmy Chen - DOE Joint Genome Institute, Walnut Creek, California, USANikos Kyrpides - DOE Joint Genome Institute, Walnut Creek, California, USAKonstantinos Mavromatis - DOE Joint Genome Institute, Walnut Creek, California, USAVictor Markowitz - DOE Joint Genome Institute, Walnut Creek, California, USAErnest Szeto - DOE Joint Genome Institute, Walnut Creek, California, USANatalia Ivanova - DOE Joint Genome Institute, Walnut Creek, California, USANatalia Mikhailova - DOE Joint Genome Institute, Walnut Creek, California, USAIoanna Pagani - DOE Joint Genome Institute, Walnut Creek, California, USAAmrita Pati - DOE Joint Genome Institute, Walnut Creek, California, USALin Peters - DOE Joint Genome Institute, Walnut Creek, California, USAGalina Ovchinnikova - DOE Joint Genome Institute, Walnut Creek, California, USALynne A Goodwin - Los Alamos National Laboratory, Bioscience Division, Los Alamos, New Mexico, USA
- Publication Details
- Standards in genomic sciences, Vol.7(3), pp.469-482
- Academic Unit
- Molecular Biosciences, School of
- Publisher
- Michigan State University
- Identifiers
- 99900547442101842
- Language
- English
- Resource Type
- Journal article