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Development of codominant simple sequence repeat, single nucleotide polymorphism and sequence characterized amplified region markers for the pea root rot pathogen, Aphanomyces euteiches
Journal article   Peer reviewed

Development of codominant simple sequence repeat, single nucleotide polymorphism and sequence characterized amplified region markers for the pea root rot pathogen, Aphanomyces euteiches

Hajime O Akamatsu, Niklaus J Grünwald, Martin I Chilvers, Lyndon D Porter and Tobin L Peever
Journal of microbiological methods, Vol.71(1), pp.82-86
2007
Handle:
https://hdl.handle.net/2376/110334
PMID: 17884212

Abstract

Aphanomyces euteiches Sequence characterized amplified region (SCAR) Pisum sativum L Simple sequence repeat (SSR) Single nucleotide polymorphism (SNP) Oomycete
Three kinds of genetic markers including simple sequence repeats (SSRs), single nucleotide polymorphisms (SNPs) and sequence characterized amplified regions (SCARs) were developed from Aphanomyces euteiches. Of 69 loci tested, seven SSR, two SNP and two SCAR markers were codominantly polymorphic. These codominant markers and dominant markers described herein will facilitate population genetic and evolutionary studies of this important plant pathogen.

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