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The organization and rate of evolution of wheat genomes are correlated with recombination rates along chromosomes arms
Genome research, Vol.13(5), pp.753-763
eScholarship, University of California
05/01/2003
Handle:
https://hdl.handle.net/2376/106333
PMCID: PMC430889
PMID: 12695326
Abstract
Genes detected by wheat expressed sequence tags (ESTs) were mapped into chromosome bins delineated by breakpoints of 159 overlapping deletions. These data were used to assess the organizational and evolutionary aspects of wheat genomes. Relative gene density and recombination rate increased with the relative distance of a bin from the centromere. Single-gene loci present once in the wheat genomes were found predominantly in the proximal, low-recombination regions, while multigene loci tended to be more frequent in distal, high-recombination regions. One-quarter of all gene motifs within wheat genomes were represented by two or more duplicated loci (paralogous sets). For 40 such sets, ancestral loci and loci derived from them by duplication were identified. Loci derived by duplication were most frequently located in distal, high-recom bi nation chromosome regions whereas ancestral loci were most frequently located proximal to them. It is suggested that recombination has played a central role in the evolution of wheat genome structure and that gradients of recombination rates along chromosome arms promote more rapid rates of genome evolution in distal, high-recombination regions than in proximal, low-recombination regions.
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Details
- Title
- The organization and rate of evolution of wheat genomes are correlated with recombination rates along chromosomes arms
- Creators
- Eduard D AkhunovAndrew W GoodyearShu GengLi-Li QiBenjamin EchalierBikram S GillJ. Perry GustafsonGerard LazoShiaoman ChaoOlin D AndersonAnna M LinkiewiczJorge DubcovskyMauricio La RotaMark E SorrellsDeshui ZhangHenry T NguyenVenugopal KalavacharlaKhwaja HossainShahryar F KianianJunhua PengNora L. V LapitanJose L Gonzalez-HernandezJames A AndersonDong-Woog ChoiTimothy J CloseMuharrem DilbirligiKulvinder S GillM. Kay Walker-SimmonsCamille SteberPatrick E McguireCalvin O QualsetJan Dvorak
- Publication Details
- Genome research, Vol.13(5), pp.753-763
- Academic Unit
- Crop and Soil Sciences, Department of
- Publisher
- eScholarship, University of California
- Identifiers
- 99900546624801842
- Language
- English
- Resource Type
- Other